Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm13422-201ENSMUST00000118834 504 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm8302-201ENSMUST00000119217 852 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm29067-201ENSMUST00000190821 470 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm42997-202ENSMUST00000200321 985 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm8959-201ENSMUST00000213150 571 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sh3d21Q7TSG5 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm44980-201ENSMUST00000205826 314 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm45398-201ENSMUST00000210561 165 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sh3d21Q7TSG5 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sh3d21Q7TSG5 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3d21Q7TSG5 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Sh3d21Q7TSG5 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sh3d21Q7TSG5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Sh3d21Q7TSG5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms