Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Gm4978-201ENSMUST00000071565 801 ntBASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Spata33-207ENSMUST00000212760 4074 ntBASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ctdp1Q7TSG2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm24891-201ENSMUST00000104391 136 ntBASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm13035-201ENSMUST00000117496 342 ntBASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm24514-201ENSMUST00000174961 285 ntBASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm8100-201ENSMUST00000182906 988 ntBASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ctdp1Q7TSG2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm45161-201ENSMUST00000207316 2263 ntBASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ctdp1Q7TSG2 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ctdp1Q7TSG2 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms