Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm12986-201ENSMUST00000119037 967 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm11667-201ENSMUST00000119828 486 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm3828-201ENSMUST00000121817 257 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm7593-201ENSMUST00000187246 644 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm44329-201ENSMUST00000197469 112 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm30671-201ENSMUST00000214898 318 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm42815-201ENSMUST00000198787 1470 ntBASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Usp49Q6P9L4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm4917-201ENSMUST00000121452 650 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm28746-201ENSMUST00000187453 380 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm10020-201ENSMUST00000081993 612 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Usp49Q6P9L4 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm5766-201ENSMUST00000160520 1977 ntBASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm28032-201ENSMUST00000184104 96 ntBASIC12.36□□□□□ -0.43
Usp49Q6P9L4 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms