Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
VcanQ62059 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm13592-201ENSMUST00000118148 1010 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Gm25426-201ENSMUST00000157606 170 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 AC125223.1-201ENSMUST00000224004 749 ntBASIC10.07□□□□□ -0.8
VcanQ62059 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.07□□□□□ -0.8
VcanQ62059 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.07□□□□□ -0.8
VcanQ62059 1700108F19Rik-205ENSMUST00000190818 1412 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
VcanQ62059 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.06□□□□□ -0.8
VcanQ62059 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.06□□□□□ -0.8
VcanQ62059 Gm12415-201ENSMUST00000141637 512 ntTSL 3 BASIC10.06□□□□□ -0.8
VcanQ62059 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm10318-201ENSMUST00000186874 930 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
VcanQ62059 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Myl7-201ENSMUST00000102921 590 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm44936-201ENSMUST00000207324 735 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Nkd1-202ENSMUST00000169179 4081 ntTSL 2 BASIC10.06□□□□□ -0.8
VcanQ62059 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.06□□□□□ -0.8
VcanQ62059 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
VcanQ62059 Gm10639-202ENSMUST00000121273 873 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm16365-201ENSMUST00000122987 629 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC10.06□□□□□ -0.8
VcanQ62059 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.06□□□□□ -0.8
VcanQ62059 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC10.06□□□□□ -0.8
VcanQ62059 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Gm18857-201ENSMUST00000210421 901 ntBASIC10.06□□□□□ -0.8
VcanQ62059 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.06□□□□□ -0.8
VcanQ62059 AC140393.4-201ENSMUST00000226994 765 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
VcanQ62059 A1cf-204ENSMUST00000224564 1432 ntBASIC10.06□□□□□ -0.8
VcanQ62059 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC10.06□□□□□ -0.8
VcanQ62059 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
VcanQ62059 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Gm13623-201ENSMUST00000118359 625 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC10.05□□□□□ -0.8
VcanQ62059 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Trav9n-1-201ENSMUST00000185224 339 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Gm18749-201ENSMUST00000222410 692 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC10.05□□□□□ -0.8
VcanQ62059 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm19114-201ENSMUST00000193972 1357 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
VcanQ62059 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.05□□□□□ -0.8
VcanQ62059 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Snord17-201ENSMUST00000104526 238 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Gm23220-201ENSMUST00000158115 137 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Gm23521-201ENSMUST00000177845 110 ntBASIC10.05□□□□□ -0.8
VcanQ62059 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
VcanQ62059 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms