Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ift88Q61371 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Olfr1349-207ENSMUST00000216447 2448 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Ift88Q61371 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ift88Q61371 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Ift88Q61371 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.21□□□□□ -0.45
Ift88Q61371 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ift88Q61371 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.21□□□□□ -0.45
Ift88Q61371 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.21□□□□□ -0.45
Ift88Q61371 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.21□□□□□ -0.45
Ift88Q61371 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Gm24992-201ENSMUST00000157412 130 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 Gm28032-201ENSMUST00000184104 96 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 Gm2260-201ENSMUST00000184965 657 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.21□□□□□ -0.45
Ift88Q61371 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.21□□□□□ -0.45
Ift88Q61371 Gm43852-201ENSMUST00000202098 917 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.21□□□□□ -0.45
Ift88Q61371 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.21□□□□□ -0.45
Ift88Q61371 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ift88Q61371 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ift88Q61371 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.21□□□□□ -0.45
Ift88Q61371 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ift88Q61371 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ift88Q61371 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.21□□□□□ -0.46
Ift88Q61371 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Ift88Q61371 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Ift88Q61371 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ift88Q61371 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Ift88Q61371 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ift88Q61371 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.2□□□□□ -0.46
Ift88Q61371 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.2□□□□□ -0.46
Ift88Q61371 Gm15528-201ENSMUST00000117821 864 ntBASIC12.2□□□□□ -0.46
Ift88Q61371 Gm8302-201ENSMUST00000119217 852 ntBASIC12.2□□□□□ -0.46
Ift88Q61371 Gm16219-201ENSMUST00000120096 274 ntBASIC12.2□□□□□ -0.46
Ift88Q61371 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Gm25492-201ENSMUST00000157383 129 ntBASIC12.2□□□□□ -0.46
Ift88Q61371 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ift88Q61371 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.2□□□□□ -0.46
Ift88Q61371 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms