Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm25201-201ENSMUST00000083093 170 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Mir8091-201ENSMUST00000183602 139 ntBASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm43435-201ENSMUST00000199996 1438 ntBASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rc3h1Q4VGL6 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm6158-201ENSMUST00000109467 904 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm5529-201ENSMUST00000165691 891 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm25026-201ENSMUST00000175017 188 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm31274-201ENSMUST00000197356 229 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm45072-201ENSMUST00000208673 929 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rc3h1Q4VGL6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms