Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm23596-201ENSMUST00000104304 132 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm24891-201ENSMUST00000104391 136 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm3116-201ENSMUST00000189440 1116 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm37599-201ENSMUST00000193067 489 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.53□□□□□ -0.88
Znf48Q3US17 AC102352.1-201ENSMUST00000224187 582 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm9996-201ENSMUST00000070359 913 ntBASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Znf48Q3US17 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Znf48Q3US17 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Znf48Q3US17 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Znf48Q3US17 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Znf48Q3US17 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Znf48Q3US17 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Znf48Q3US17 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Znf48Q3US17 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Znf48Q3US17 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.52□□□□□ -0.88
Znf48Q3US17 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Znf48Q3US17 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Rmrp-201ENSMUST00000157463 271 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm23153-201ENSMUST00000175323 313 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Znf48Q3US17 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm10774-201ENSMUST00000188689 204 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 Gm5650-201ENSMUST00000209641 598 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 CT025526.1-201ENSMUST00000217327 267 ntBASIC9.52□□□□□ -0.89
Znf48Q3US17 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms