Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm8480-201ENSMUST00000190350 698 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm7003-201ENSMUST00000195089 312 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Gm43962-201ENSMUST00000203898 190 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Shisa3Q3UPR0 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm5616-201ENSMUST00000165252 384 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm8741-201ENSMUST00000174736 384 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm37666-201ENSMUST00000194110 866 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm37002-201ENSMUST00000194560 373 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm37490-201ENSMUST00000195566 724 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm37466-201ENSMUST00000195692 652 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 AY036118-201ENSMUST00000200021 923 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm6450-201ENSMUST00000200896 574 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm32111-201ENSMUST00000207689 846 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm5363-201ENSMUST00000211927 938 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 AC153936.1-201ENSMUST00000219874 395 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 AC242269.1-201ENSMUST00000227020 741 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 CT025525.2-201ENSMUST00000227743 423 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Gm5455-201ENSMUST00000058710 715 ntBASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Shisa3Q3UPR0 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms