Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gm7003-201ENSMUST00000195089 312 ntBASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.74□□□□□ -0.53
Trim43aQ3TL54 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.74□□□□□ -0.53
Trim43aQ3TL54 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm11941-201ENSMUST00000119904 610 ntBASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm15329-201ENSMUST00000121408 155 ntBASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm15549-201ENSMUST00000121595 622 ntBASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm7848-201ENSMUST00000210739 718 ntBASIC11.73□□□□□ -0.53
Trim43aQ3TL54 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trim43aQ3TL54 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm23200-201ENSMUST00000104379 132 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm12579-201ENSMUST00000118040 783 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm2965-201ENSMUST00000198365 343 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm8342-201ENSMUST00000209839 757 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim43aQ3TL54 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms