Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cul4aQ3TCH7 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm27341-201ENSMUST00000183570 106 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm5865-201ENSMUST00000198713 637 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm5451-201ENSMUST00000080545 579 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cul4aQ3TCH7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm23272-201ENSMUST00000104053 129 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm7857-201ENSMUST00000117957 358 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm14277-201ENSMUST00000121195 360 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm7985-201ENSMUST00000183329 981 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm31941-201ENSMUST00000209689 350 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm1821-202ENSMUST00000227415 750 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Gm5468-202ENSMUST00000227851 682 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Ginm1-202ENSMUST00000065124 300 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cul4aQ3TCH7 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cul4aQ3TCH7 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cul4aQ3TCH7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cul4aQ3TCH7 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms