Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Gm27514-201ENSMUST00000183692 110 ntBASIC9.28□□□□□ -0.92
SgcaP82350 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC9.28□□□□□ -0.92
SgcaP82350 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.28□□□□□ -0.92
SgcaP82350 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
SgcaP82350 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.28□□□□□ -0.92
SgcaP82350 Morn2-202ENSMUST00000227729 656 ntBASIC9.28□□□□□ -0.92
SgcaP82350 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SgcaP82350 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SgcaP82350 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.28□□□□□ -0.92
SgcaP82350 Stau1-202ENSMUST00000109235 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
SgcaP82350 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Gm42971-201ENSMUST00000199228 2079 ntBASIC9.28□□□□□ -0.92
SgcaP82350 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Epb41-204ENSMUST00000105970 5059 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
SgcaP82350 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.28□□□□□ -0.92
SgcaP82350 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
SgcaP82350 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.27□□□□□ -0.92
SgcaP82350 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
SgcaP82350 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
SgcaP82350 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SgcaP82350 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
SgcaP82350 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
SgcaP82350 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
SgcaP82350 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
SgcaP82350 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.27□□□□□ -0.93
SgcaP82350 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.27□□□□□ -0.93
SgcaP82350 Gm15547-201ENSMUST00000122152 333 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.27□□□□□ -0.93
SgcaP82350 Gm26047-201ENSMUST00000157308 113 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
SgcaP82350 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.27□□□□□ -0.93
SgcaP82350 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Gm26047-202ENSMUST00000198840 115 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Gm19187-201ENSMUST00000206781 892 ntBASIC9.27□□□□□ -0.93
SgcaP82350 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.27□□□□□ -0.93
SgcaP82350 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 AC123619.2-202ENSMUST00000225097 1568 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
SgcaP82350 Gm38227-201ENSMUST00000193036 1602 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Gm7967-202ENSMUST00000191042 5042 ntBASIC9.27□□□□□ -0.93
SgcaP82350 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
SgcaP82350 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
SgcaP82350 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
SgcaP82350 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
SgcaP82350 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
SgcaP82350 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms