Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
PrkcbP68404 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PrkcbP68404 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PrkcbP68404 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PrkcbP68404 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
PrkcbP68404 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
PrkcbP68404 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
PrkcbP68404 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.96□□□□□ -0.49
PrkcbP68404 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Gm25880-201ENSMUST00000104331 132 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.96□□□□□ -0.49
PrkcbP68404 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.96□□□□□ -0.49
PrkcbP68404 Gm5529-201ENSMUST00000165691 891 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
PrkcbP68404 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.96□□□□□ -0.49
PrkcbP68404 Mir7035-201ENSMUST00000184713 82 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
PrkcbP68404 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
PrkcbP68404 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Gm5302-201ENSMUST00000202130 796 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.96□□□□□ -0.49
PrkcbP68404 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11.96□□□□□ -0.49
PrkcbP68404 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
PrkcbP68404 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
PrkcbP68404 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
PrkcbP68404 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
PrkcbP68404 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.95□□□□□ -0.5
PrkcbP68404 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Gm13019-201ENSMUST00000120000 276 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Gm14165-201ENSMUST00000121456 952 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Gm24074-201ENSMUST00000158178 260 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm24809-201ENSMUST00000175318 271 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Gm28032-201ENSMUST00000184104 96 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm6423-201ENSMUST00000204315 934 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.95□□□□□ -0.5
PrkcbP68404 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.95□□□□□ -0.5
PrkcbP68404 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
PrkcbP68404 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
PrkcbP68404 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
PrkcbP68404 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms