Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm5525-201ENSMUST00000190438 1312 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC7.83□□□□□ -1.16
Rpl39P62892 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Rpl39P62892 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Mup-ps29-201ENSMUST00000122281 202 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm24074-201ENSMUST00000158178 260 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC7.83□□□□□ -1.16
Rpl39P62892 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Gm37301-201ENSMUST00000195412 568 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Gm5302-201ENSMUST00000202130 796 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm42867-201ENSMUST00000202995 469 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm18054-201ENSMUST00000207539 555 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC7.83□□□□□ -1.16
Rpl39P62892 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC7.83□□□□□ -1.16
Rpl39P62892 Arhgef33-209ENSMUST00000225223 714 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 CT485787.1-201ENSMUST00000225617 968 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Gm26448-201ENSMUST00000082446 203 ntBASIC7.83□□□□□ -1.16
Rpl39P62892 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
Rpl39P62892 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Rpl39P62892 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC7.83□□□□□ -1.16
Rpl39P62892 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Rpl39P62892 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC7.82□□□□□ -1.16
Rpl39P62892 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm12241-201ENSMUST00000118330 726 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm11941-201ENSMUST00000119904 610 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm11424-201ENSMUST00000121929 829 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm5616-201ENSMUST00000165252 384 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm8741-201ENSMUST00000174736 384 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm10807-201ENSMUST00000177134 795 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm27627-201ENSMUST00000183644 150 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm27441-201ENSMUST00000185000 105 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Gm37424-201ENSMUST00000191727 561 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Rpl39P62892 AC154461.3-201ENSMUST00000224831 573 ntBASIC7.82□□□□□ -1.16
Rpl39P62892 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms