Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tubgcp3P58854 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm20426-201ENSMUST00000173657 440 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm43916-201ENSMUST00000205062 967 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.31□□□□□ -0.6
Tubgcp3P58854 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tubgcp3P58854 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Gm37905-201ENSMUST00000195310 341 ntBASIC11.3□□□□□ -0.6
Tubgcp3P58854 Gm43378-201ENSMUST00000199336 582 ntBASIC11.3□□□□□ -0.6
Tubgcp3P58854 Gm5302-201ENSMUST00000202130 796 ntBASIC11.3□□□□□ -0.6
Tubgcp3P58854 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.3□□□□□ -0.6
Tubgcp3P58854 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.3□□□□□ -0.6
Tubgcp3P58854 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tubgcp3P58854 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms