Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cux1P53564 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cux1P53564 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cux1P53564 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cux1P53564 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cux1P53564 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cux1P53564 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.78■□□□□ 0.28
Cux1P53564 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC16.78■□□□□ 0.28
Cux1P53564 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Gm7642-201ENSMUST00000216345 1809 ntBASIC16.78■□□□□ 0.28
Cux1P53564 Gm37472-201ENSMUST00000192342 4052 ntBASIC16.78■□□□□ 0.28
Cux1P53564 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cux1P53564 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 AC122860.2-201ENSMUST00000217967 2671 ntBASIC16.78■□□□□ 0.28
Cux1P53564 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Gm13505-201ENSMUST00000121666 817 ntBASIC16.78■□□□□ 0.28
Cux1P53564 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Cux1P53564 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC16.78■□□□□ 0.28
Cux1P53564 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC16.78■□□□□ 0.28
Cux1P53564 Mcpt4-201ENSMUST00000043249 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Cux1P53564 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cux1P53564 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.78■□□□□ 0.28
Cux1P53564 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC16.78■□□□□ 0.28
Cux1P53564 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cux1P53564 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cux1P53564 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cux1P53564 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.77■□□□□ 0.28
Cux1P53564 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cux1P53564 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cux1P53564 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Cux1P53564 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC16.77■□□□□ 0.28
Cux1P53564 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC16.77■□□□□ 0.28
Cux1P53564 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC16.77■□□□□ 0.28
Cux1P53564 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC16.77■□□□□ 0.28
Cux1P53564 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cux1P53564 Gm38038-201ENSMUST00000193803 259 ntBASIC16.77■□□□□ 0.28
Cux1P53564 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Cux1P53564 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC16.77■□□□□ 0.27
Cux1P53564 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cux1P53564 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC16.76■□□□□ 0.27
Cux1P53564 Gm28746-201ENSMUST00000187453 380 ntBASIC16.76■□□□□ 0.27
Cux1P53564 Gm37944-201ENSMUST00000194233 414 ntBASIC16.76■□□□□ 0.27
Cux1P53564 Gm8828-201ENSMUST00000196786 1290 ntBASIC16.76■□□□□ 0.27
Cux1P53564 1700047G03Rik-205ENSMUST00000227822 1048 ntBASIC16.76■□□□□ 0.27
Cux1P53564 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cux1P53564 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC16.76■□□□□ 0.27
Cux1P53564 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC16.76■□□□□ 0.27
Cux1P53564 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cux1P53564 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Cux1P53564 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cux1P53564 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cux1P53564 Gm26875-201ENSMUST00000181006 950 ntBASIC16.75■□□□□ 0.27
Cux1P53564 Gm26943-201ENSMUST00000182295 957 ntBASIC16.75■□□□□ 0.27
Cux1P53564 Gm28179-201ENSMUST00000188365 613 ntBASIC16.75■□□□□ 0.27
Cux1P53564 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cux1P53564 Gm7539-201ENSMUST00000189789 630 ntBASIC16.75■□□□□ 0.27
Cux1P53564 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cux1P53564 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cux1P53564 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms