Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Chd1P40201 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chd1P40201 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Gm8216-201ENSMUST00000117232 601 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm14323-201ENSMUST00000122418 627 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm17806-201ENSMUST00000195844 383 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm5865-201ENSMUST00000198713 637 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC16.22■□□□□ 0.19
Chd1P40201 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm35412-201ENSMUST00000220437 999 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd1P40201 Zfp640-201ENSMUST00000071320 894 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd1P40201 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 AC157950.1-201ENSMUST00000217561 2168 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Chd1P40201 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Gm15369-201ENSMUST00000119681 394 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm22987-201ENSMUST00000122757 246 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm29548-201ENSMUST00000187012 694 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm28105-201ENSMUST00000187788 694 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chd1P40201 Ighv1-33-201ENSMUST00000193220 350 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Gm5684-201ENSMUST00000198419 961 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd1P40201 AC167019.2-201ENSMUST00000227335 845 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm4925-201ENSMUST00000092231 397 ntBASIC16.22■□□□□ 0.19
Chd1P40201 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Chd1P40201 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chd1P40201 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chd1P40201 5330411J11Rik-201ENSMUST00000137162 1635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC16.21■□□□□ 0.19
Chd1P40201 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC16.21■□□□□ 0.19
Chd1P40201 Gm44663-201ENSMUST00000206898 3150 ntBASIC16.21■□□□□ 0.19
Chd1P40201 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chd1P40201 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Chd1P40201 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Gm12489-201ENSMUST00000119364 148 ntBASIC16.21■□□□□ 0.19
Chd1P40201 Gm14834-201ENSMUST00000119416 795 ntBASIC16.21■□□□□ 0.19
Chd1P40201 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC16.21■□□□□ 0.19
Chd1P40201 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC16.21■□□□□ 0.19
Chd1P40201 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chd1P40201 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Chd1P40201 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Gm14828-201ENSMUST00000119381 1155 ntBASIC16.2■□□□□ 0.18
Chd1P40201 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC16.2■□□□□ 0.18
Chd1P40201 Gm23081-201ENSMUST00000157845 297 ntBASIC16.2■□□□□ 0.18
Chd1P40201 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Gm18471-201ENSMUST00000208272 452 ntBASIC16.2■□□□□ 0.18
Chd1P40201 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC16.2■□□□□ 0.18
Chd1P40201 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd1P40201 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms