Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Gm23045-201ENSMUST00000175041 96 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Gm21092-201ENSMUST00000178995 955 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.69□□□□□ -0.7
Fv4P11370 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.69□□□□□ -0.7
Fv4P11370 Gm32111-201ENSMUST00000207689 846 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.69□□□□□ -0.7
Fv4P11370 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 AA474408-201ENSMUST00000098110 3339 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Fv4P11370 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Fv4P11370 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Fv4P11370 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gm13045-201ENSMUST00000119019 712 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.68□□□□□ -0.7
Fv4P11370 Gm25226-201ENSMUST00000158198 123 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC10.68□□□□□ -0.7
Fv4P11370 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.68□□□□□ -0.7
Fv4P11370 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Fv4P11370 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Fv4P11370 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Fv4P11370 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Fv4P11370 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.68□□□□□ -0.7
Fv4P11370 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Fv4P11370 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Fv4P11370 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Fv4P11370 Gm6768-201ENSMUST00000022467 1878 ntBASIC10.68□□□□□ -0.7
Fv4P11370 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Fv4P11370 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Fv4P11370 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Fv4P11370 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Fv4P11370 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.67□□□□□ -0.7
Fv4P11370 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Fv4P11370 Gm23061-201ENSMUST00000102348 116 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms