Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Gm43610-201ENSMUST00000199117 365 ntBASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Gm9619-201ENSMUST00000211587 762 ntBASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.26□□□□□ -0.45
Scn3aA2ASI5 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scn3aA2ASI5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm25226-201ENSMUST00000158198 123 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm20493-201ENSMUST00000173706 213 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm42617-201ENSMUST00000197640 1229 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm25125-201ENSMUST00000083340 136 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm12570-201ENSMUST00000122047 1030 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm25998-201ENSMUST00000175397 53 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm8384-201ENSMUST00000190905 704 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm44420-201ENSMUST00000203669 490 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scn3aA2ASI5 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn3aA2ASI5 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms