Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Snx29Q9D3S3 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm23595-201ENSMUST00000104306 130 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm5526-201ENSMUST00000153604 423 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm18010-201ENSMUST00000203553 202 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm8162-201ENSMUST00000213951 665 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm14005-208ENSMUST00000223654 681 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.2□□□□□ -0.46
Snx29Q9D3S3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm8019-201ENSMUST00000119317 587 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm25998-201ENSMUST00000175397 53 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Snx29Q9D3S3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snx29Q9D3S3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Snx29Q9D3S3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms