Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm22877-201ENSMUST00000175451 105 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm44323-201ENSMUST00000198689 129 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Mt1-202ENSMUST00000211807 1085 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.93□□□□□ -0.5
Tlr3Q99MB1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Tlr3Q99MB1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm4917-201ENSMUST00000121452 650 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm30946-201ENSMUST00000198288 724 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Gm9111-201ENSMUST00000219394 709 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Tlr3Q99MB1 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Tlr3Q99MB1 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.91□□□□□ -0.5
Tlr3Q99MB1 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms