Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Nkx6-1Q99MA9 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm12986-201ENSMUST00000119037 967 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm8152-201ENSMUST00000120842 637 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm22344-201ENSMUST00000122642 278 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm4943-201ENSMUST00000132879 424 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm16305-201ENSMUST00000140747 556 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Olfml3-204ENSMUST00000169286 874 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Cd9-ps-201ENSMUST00000174687 650 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm38314-201ENSMUST00000195709 625 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm43460-201ENSMUST00000202491 1057 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx6-1Q99MA9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm18733-202ENSMUST00000174447 401 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm24312-201ENSMUST00000178677 119 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.5□□□□□ -0.73
Nkx6-1Q99MA9 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms