Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm13284-201ENSMUST00000121020 547 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Mir6998-201ENSMUST00000183343 64 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Vmn1r28Q8R2C9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm12986-201ENSMUST00000119037 967 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm4917-201ENSMUST00000121452 650 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Snord55-201ENSMUST00000174939 79 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm42518-201ENSMUST00000196277 938 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm39288-201ENSMUST00000210554 446 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm9139-201ENSMUST00000218817 700 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Vmn1r28Q8R2C9 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 156.7 ms