Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cnot6Q8K3P5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm14058-201ENSMUST00000116082 735 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm37597-201ENSMUST00000191853 382 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm19208-201ENSMUST00000213861 912 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cnot6Q8K3P5 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm12579-201ENSMUST00000118040 783 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Mir1896-201ENSMUST00000122641 81 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Gm43930-201ENSMUST00000203868 845 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cnot6Q8K3P5 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms