Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm11700-201ENSMUST00000119409 403 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Mir1905-201ENSMUST00000122779 82 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm26368-201ENSMUST00000157826 118 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm25677-201ENSMUST00000174983 72 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm8197-202ENSMUST00000193422 934 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm42430-201ENSMUST00000197209 616 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm40879-201ENSMUST00000220759 612 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccdc17Q8CE13 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm16219-201ENSMUST00000120096 274 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm38314-201ENSMUST00000195709 625 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm43752-201ENSMUST00000198475 697 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gm44323-201ENSMUST00000198689 129 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Smok4a-201ENSMUST00000074512 1455 ntBASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Ccdc17Q8CE13 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccdc17Q8CE13 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms