Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Btrc-209ENSMUST00000224478 2194 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm30946-201ENSMUST00000198288 724 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm44953-201ENSMUST00000208745 1286 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Pcdh19Q80TF3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pcdh19Q80TF3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm12791-201ENSMUST00000120788 655 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm16030-201ENSMUST00000159098 603 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm9369-201ENSMUST00000196009 733 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm18059-201ENSMUST00000208073 580 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm16380-201ENSMUST00000077997 478 ntBASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pcdh19Q80TF3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms