Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm18212-201ENSMUST00000211678 889 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 AA474408-201ENSMUST00000098110 3339 ntBASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Smarcd3Q6P9Z1 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm15329-201ENSMUST00000121408 155 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm15549-201ENSMUST00000121595 622 ntBASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.16□□□□□ -0.78
Smarcd3Q6P9Z1 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms