Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm11380-201ENSMUST00000118067 560 ntBASIC10.09□□□□□ -0.79
VcanQ62059 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC10.09□□□□□ -0.79
VcanQ62059 Ighv5-10-201ENSMUST00000194591 252 ntBASIC10.09□□□□□ -0.79
VcanQ62059 Gm43664-201ENSMUST00000196038 734 ntBASIC10.09□□□□□ -0.79
VcanQ62059 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.09□□□□□ -0.79
VcanQ62059 Gm37368-201ENSMUST00000193173 3212 ntBASIC10.09□□□□□ -0.79
VcanQ62059 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
VcanQ62059 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
VcanQ62059 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.09□□□□□ -0.79
VcanQ62059 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Snora68-201ENSMUST00000104375 131 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.08□□□□□ -0.8
VcanQ62059 AC162940.1-201ENSMUST00000224745 1167 ntBASIC10.08□□□□□ -0.8
VcanQ62059 AC154760.1-201ENSMUST00000227218 673 ntBASIC10.08□□□□□ -0.8
VcanQ62059 AC148324.1-201ENSMUST00000219034 4240 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Gm38227-201ENSMUST00000193036 1602 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Gm11771-201ENSMUST00000118124 732 ntBASIC10.08□□□□□ -0.8
VcanQ62059 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
VcanQ62059 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Gm15031-201ENSMUST00000121341 210 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Cfap77-202ENSMUST00000157048 1042 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Sfta2-201ENSMUST00000171166 508 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Gm9866-201ENSMUST00000177636 486 ntTSL 5 BASIC10.08□□□□□ -0.8
VcanQ62059 Gm5696-201ENSMUST00000189850 552 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Gm37261-201ENSMUST00000194360 1101 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Gm10120-201ENSMUST00000219845 357 ntBASIC10.08□□□□□ -0.8
VcanQ62059 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
VcanQ62059 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
VcanQ62059 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
VcanQ62059 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC10.07□□□□□ -0.8
VcanQ62059 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC10.07□□□□□ -0.8
VcanQ62059 Gm23999-201ENSMUST00000158057 104 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm9513-201ENSMUST00000165591 306 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Gm37678-201ENSMUST00000192908 1146 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.07□□□□□ -0.8
VcanQ62059 1700066J03Rik-202ENSMUST00000224280 516 ntBASIC10.07□□□□□ -0.8
VcanQ62059 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
VcanQ62059 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
VcanQ62059 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
VcanQ62059 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC10.07□□□□□ -0.8
VcanQ62059 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
VcanQ62059 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms