Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm6390-201ENSMUST00000215034 589 ntBASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 AC132881.2-201ENSMUST00000225474 709 ntBASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rc3h1Q4VGL6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 AC154435.1-201ENSMUST00000223938 959 ntBASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rc3h1Q4VGL6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm11380-201ENSMUST00000118067 560 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm12783-201ENSMUST00000121425 397 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm22146-201ENSMUST00000157397 288 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm6423-201ENSMUST00000204315 934 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm45166-201ENSMUST00000209073 683 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 AC172027.1-201ENSMUST00000217659 337 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Gm9111-201ENSMUST00000219394 709 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rc3h1Q4VGL6 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms