Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm4654-201ENSMUST00000183305 982 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm27910-201ENSMUST00000185004 107 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm9540-201ENSMUST00000188230 478 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm8365-201ENSMUST00000197334 648 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm44551-201ENSMUST00000208804 171 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 AC154314.2-201ENSMUST00000223677 3502 ntBASIC8.62□□□□□ -1.03
Cdx4Q07424 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.62□□□□□ -1.03
Cdx4Q07424 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cdx4Q07424 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm13347-201ENSMUST00000120298 1353 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm3150-201ENSMUST00000166418 204 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm23771-201ENSMUST00000178702 110 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm17877-201ENSMUST00000192578 814 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm44421-201ENSMUST00000205064 1221 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC8.61□□□□□ -1.03
Cdx4Q07424 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC8.61□□□□□ -1.03
Cdx4Q07424 AC124433.1-201ENSMUST00000224483 1063 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
Cdx4Q07424 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
Cdx4Q07424 Btrc-209ENSMUST00000224478 2194 ntBASIC8.61□□□□□ -1.03
Cdx4Q07424 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC8.61□□□□□ -1.03
Cdx4Q07424 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm5380-201ENSMUST00000119296 2136 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Gm44415-201ENSMUST00000204151 2112 ntBASIC8.6□□□□□ -1.03
Cdx4Q07424 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC8.6□□□□□ -1.03
Cdx4Q07424 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Cdx4Q07424 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms