Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm23439-201ENSMUST00000104292 132 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm23582-201ENSMUST00000158530 139 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm6291-201ENSMUST00000179994 309 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm8601-201ENSMUST00000182096 909 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm27316-201ENSMUST00000184884 277 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm7445-201ENSMUST00000192115 340 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm35960-201ENSMUST00000202712 767 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm6794-201ENSMUST00000203829 457 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Gm45310-201ENSMUST00000210436 275 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 AC129217.1-201ENSMUST00000225181 642 ntBASIC13.92□□□□□ -0.18
Smarcc1P97496 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcc1P97496 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smarcc1P97496 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gm6441-201ENSMUST00000120983 696 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gm29808-201ENSMUST00000194419 468 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.91□□□□□ -0.18
Smarcc1P97496 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarcc1P97496 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarcc1P97496 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm6755-201ENSMUST00000100598 864 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm6740-201ENSMUST00000100617 864 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm23604-201ENSMUST00000104311 132 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm13286-201ENSMUST00000117750 537 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Gm15746-201ENSMUST00000120684 1027 ntBASIC13.9□□□□□ -0.18
Smarcc1P97496 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms