Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lsm6P62313 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Lsm6P62313 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.76□□□□□ -0.85
Lsm6P62313 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lsm6P62313 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm13422-201ENSMUST00000118834 504 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Gm14942-201ENSMUST00000119642 336 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Gm13408-201ENSMUST00000119822 798 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm13935-201ENSMUST00000121859 798 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm15881-201ENSMUST00000148792 942 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm16570-201ENSMUST00000161951 436 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lsm6P62313 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm28032-201ENSMUST00000184104 96 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Gm37466-201ENSMUST00000195692 652 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Lsm6P62313 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.76□□□□□ -0.85
Lsm6P62313 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Lsm6P62313 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Lsm6P62313 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lsm6P62313 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Lsm6P62313 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
Lsm6P62313 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.75□□□□□ -0.85
Lsm6P62313 Gm14592-201ENSMUST00000117201 560 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 Gm14585-201ENSMUST00000120713 634 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Mir6546-201ENSMUST00000184460 62 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Gm37301-201ENSMUST00000195412 568 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 Gm18165-201ENSMUST00000217426 928 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.75□□□□□ -0.85
Lsm6P62313 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Lsm6P62313 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Lsm6P62313 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Lsm6P62313 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms