Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.49□□□□□ -0.41
Rrp1P56183 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.48□□□□□ -0.41
Rrp1P56183 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Gm11735-201ENSMUST00000106377 1581 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.48□□□□□ -0.41
Rrp1P56183 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Gm15528-201ENSMUST00000117821 864 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gm7857-201ENSMUST00000117957 358 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.48□□□□□ -0.41
Rrp1P56183 Mir7070-201ENSMUST00000183657 86 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gm42859-201ENSMUST00000199572 193 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Rrp1P56183 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Gm9111-201ENSMUST00000219394 709 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Ntng1-201ENSMUST00000051253 327 ntBASIC12.48□□□□□ -0.41
Rrp1P56183 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Rrp1P56183 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rrp1P56183 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rrp1P56183 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm13035-201ENSMUST00000117496 342 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Gm7851-201ENSMUST00000117574 323 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Gm12266-201ENSMUST00000120311 962 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm24992-201ENSMUST00000157412 130 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.47□□□□□ -0.41
Rrp1P56183 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Gm18753-201ENSMUST00000201000 566 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Gm8574-201ENSMUST00000203207 924 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rrp1P56183 Olfr584-201ENSMUST00000098210 964 ntBASIC12.47□□□□□ -0.41
Rrp1P56183 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rrp1P56183 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rrp1P56183 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.47□□□□□ -0.41
Rrp1P56183 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms