Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Gm11450-201ENSMUST00000121144 333 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.32□□□□□ -0.6
SftpbP50405 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.32□□□□□ -0.6
SftpbP50405 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.32□□□□□ -0.6
SftpbP50405 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SftpbP50405 Gm43058-201ENSMUST00000197645 625 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.32□□□□□ -0.6
SftpbP50405 AU022133-201ENSMUST00000200601 873 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Gm8574-201ENSMUST00000203207 924 ntBASIC11.32□□□□□ -0.6
SftpbP50405 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.32□□□□□ -0.6
SftpbP50405 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Gm5369-201ENSMUST00000217499 588 ntBASIC11.32□□□□□ -0.6
SftpbP50405 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.32□□□□□ -0.6
SftpbP50405 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.32□□□□□ -0.6
SftpbP50405 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SftpbP50405 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SftpbP50405 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.31□□□□□ -0.6
SftpbP50405 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SftpbP50405 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SftpbP50405 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gm11573-201ENSMUST00000119956 394 ntBASIC11.31□□□□□ -0.6
SftpbP50405 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.31□□□□□ -0.6
SftpbP50405 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.31□□□□□ -0.6
SftpbP50405 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
SftpbP50405 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.31□□□□□ -0.6
SftpbP50405 Gm44506-201ENSMUST00000206278 965 ntBASIC11.31□□□□□ -0.6
SftpbP50405 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.31□□□□□ -0.6
SftpbP50405 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.31□□□□□ -0.6
SftpbP50405 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SftpbP50405 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
SftpbP50405 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SftpbP50405 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SftpbP50405 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SftpbP50405 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SftpbP50405 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SftpbP50405 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SftpbP50405 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms