Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.82□□□□□ -0.84
GdnfP48540 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
GdnfP48540 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.82□□□□□ -0.84
GdnfP48540 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
GdnfP48540 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Gm12463-201ENSMUST00000118271 849 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm12997-201ENSMUST00000120207 640 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm24990-201ENSMUST00000157406 323 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
GdnfP48540 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm26736-201ENSMUST00000180425 1236 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm20239-201ENSMUST00000196610 982 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm43966-201ENSMUST00000203301 612 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.81□□□□□ -0.84
GdnfP48540 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.81□□□□□ -0.84
GdnfP48540 CT025552.1-201ENSMUST00000224561 521 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
GdnfP48540 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.81□□□□□ -0.84
GdnfP48540 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.81□□□□□ -0.84
GdnfP48540 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
GdnfP48540 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
GdnfP48540 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC9.8□□□□□ -0.84
GdnfP48540 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Gm14028-201ENSMUST00000117434 479 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm14277-201ENSMUST00000121195 360 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm4310-201ENSMUST00000177847 889 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
GdnfP48540 Gm8343-201ENSMUST00000182705 994 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm28686-201ENSMUST00000187404 609 ntBASIC9.8□□□□□ -0.84
GdnfP48540 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Gm43184-201ENSMUST00000197247 542 ntBASIC9.8□□□□□ -0.84
GdnfP48540 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.8□□□□□ -0.84
GdnfP48540 Gm18212-201ENSMUST00000211678 889 ntBASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms