Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Prox1P48437 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Prox1P48437 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.66□□□□□ -0.7
Prox1P48437 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.66□□□□□ -0.7
Prox1P48437 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Prox1P48437 Gm13665-201ENSMUST00000120830 528 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Mir1896-201ENSMUST00000122641 81 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.66□□□□□ -0.7
Prox1P48437 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Gm25700-201ENSMUST00000177693 110 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Prox1P48437 Mir7677-201ENSMUST00000184226 67 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Gm28686-201ENSMUST00000187404 609 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Gm38317-201ENSMUST00000195564 343 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Gm44008-201ENSMUST00000204345 412 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.66□□□□□ -0.7
Prox1P48437 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Gm26448-201ENSMUST00000082446 203 ntBASIC10.66□□□□□ -0.7
Prox1P48437 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Prox1P48437 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Prox1P48437 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.65□□□□□ -0.7
Prox1P48437 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.65□□□□□ -0.7
Prox1P48437 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Gm10417-201ENSMUST00000194341 3522 ntBASIC10.65□□□□□ -0.7
Prox1P48437 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.65□□□□□ -0.7
Prox1P48437 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Prox1P48437 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.65□□□□□ -0.7
Prox1P48437 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.65□□□□□ -0.7
Prox1P48437 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Mir7070-201ENSMUST00000183657 86 ntBASIC10.65□□□□□ -0.7
Prox1P48437 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Prox1P48437 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.65□□□□□ -0.7
Prox1P48437 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.65□□□□□ -0.7
Prox1P48437 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Prox1P48437 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Prox1P48437 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Prox1P48437 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.65□□□□□ -0.71
Prox1P48437 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Prox1P48437 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.65□□□□□ -0.71
Prox1P48437 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Prox1P48437 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Prox1P48437 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Prox1P48437 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Prox1P48437 AA474408-201ENSMUST00000098110 3339 ntBASIC10.64□□□□□ -0.71
Prox1P48437 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.64□□□□□ -0.71
Prox1P48437 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Prox1P48437 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Prox1P48437 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Prox1P48437 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Prox1P48437 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Prox1P48437 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Prox1P48437 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Prox1P48437 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms