Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.35□□□□□ -0.75
Sox2P48432 Gm38341-201ENSMUST00000195357 515 ntBASIC10.35□□□□□ -0.75
Sox2P48432 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.35□□□□□ -0.75
Sox2P48432 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.35□□□□□ -0.75
Sox2P48432 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.35□□□□□ -0.75
Sox2P48432 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Sox2P48432 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC10.35□□□□□ -0.75
Sox2P48432 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sox2P48432 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Sox2P48432 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Sox2P48432 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Sox2P48432 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.35□□□□□ -0.75
Sox2P48432 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC10.35□□□□□ -0.75
Sox2P48432 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.34□□□□□ -0.75
Sox2P48432 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Sox2P48432 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC10.34□□□□□ -0.75
Sox2P48432 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sox2P48432 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Gm12579-201ENSMUST00000118040 783 ntBASIC10.34□□□□□ -0.75
Sox2P48432 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Gm24074-201ENSMUST00000158178 260 ntBASIC10.34□□□□□ -0.75
Sox2P48432 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.34□□□□□ -0.75
Sox2P48432 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sox2P48432 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC10.34□□□□□ -0.75
Sox2P48432 Gm38321-201ENSMUST00000195053 235 ntBASIC10.34□□□□□ -0.75
Sox2P48432 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.34□□□□□ -0.75
Sox2P48432 Gm7504-201ENSMUST00000201449 424 ntBASIC10.34□□□□□ -0.75
Sox2P48432 Gm6108-201ENSMUST00000208365 367 ntBASIC10.34□□□□□ -0.75
Sox2P48432 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.34□□□□□ -0.75
Sox2P48432 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.34□□□□□ -0.75
Sox2P48432 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Sox2P48432 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Sox2P48432 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sox2P48432 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.34□□□□□ -0.75
Sox2P48432 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC10.34□□□□□ -0.75
Sox2P48432 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Sox2P48432 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sox2P48432 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.33□□□□□ -0.76
Sox2P48432 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.33□□□□□ -0.76
Sox2P48432 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Sox2P48432 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sox2P48432 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Sox2P48432 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Gm13916-201ENSMUST00000117368 628 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Gm15549-201ENSMUST00000121595 622 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Sox2P48432 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.33□□□□□ -0.76
Sox2P48432 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Gm16505-201ENSMUST00000179981 232 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.33□□□□□ -0.76
Sox2P48432 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.33□□□□□ -0.76
Sox2P48432 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.33□□□□□ -0.76
Sox2P48432 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.33□□□□□ -0.76
Sox2P48432 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.33□□□□□ -0.76
Sox2P48432 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sox2P48432 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Sox2P48432 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms