Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Rph3aP47708 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.79□□□□□ -0.68
Rph3aP47708 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm37608-201ENSMUST00000195696 1880 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm38227-201ENSMUST00000193036 1602 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm8302-201ENSMUST00000119217 852 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.78□□□□□ -0.68
Rph3aP47708 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.78□□□□□ -0.68
Rph3aP47708 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.78□□□□□ -0.68
Rph3aP47708 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm23694-201ENSMUST00000179335 110 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm3551-201ENSMUST00000190750 664 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm9132-201ENSMUST00000210182 832 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm23105-201ENSMUST00000083719 134 ntBASIC10.78□□□□□ -0.68
Rph3aP47708 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Olfr169-203ENSMUST00000215476 2476 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Rph3aP47708 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Rph3aP47708 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rph3aP47708 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Rph3aP47708 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Rph3aP47708 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.77□□□□□ -0.68
Rph3aP47708 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Rph3aP47708 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Gm14395-201ENSMUST00000120494 563 ntBASIC10.77□□□□□ -0.69
Rph3aP47708 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.77□□□□□ -0.69
Rph3aP47708 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Rph3aP47708 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 349.4 ms