Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.1□□□□□ -0.63
Nckap1P28660 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.1□□□□□ -0.63
Nckap1P28660 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.1□□□□□ -0.63
Nckap1P28660 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nckap1P28660 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Nckap1P28660 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 Gm12986-201ENSMUST00000119037 967 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 Gm14165-201ENSMUST00000121456 952 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.09□□□□□ -0.63
Nckap1P28660 Gm5529-201ENSMUST00000165691 891 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 Snord55-201ENSMUST00000174939 79 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Gm18035-201ENSMUST00000211962 589 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 Gm7525-201ENSMUST00000219425 454 ntBASIC11.09□□□□□ -0.63
Nckap1P28660 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nckap1P28660 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nckap1P28660 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nckap1P28660 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Nckap1P28660 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nckap1P28660 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.63
Nckap1P28660 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Nckap1P28660 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Nckap1P28660 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 Gm16165-201ENSMUST00000160140 795 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Gm26119-201ENSMUST00000175601 104 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 Gm26976-201ENSMUST00000182929 908 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.08□□□□□ -0.64
Nckap1P28660 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nckap1P28660 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nckap1P28660 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nckap1P28660 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.08□□□□□ -0.64
Nckap1P28660 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nckap1P28660 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms