Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm43482-201ENSMUST00000202797 1861 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Col8a2P25318 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC9.24□□□□□ -0.93
Col8a2P25318 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm17221-201ENSMUST00000163909 481 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 Gm17073-201ENSMUST00000168069 556 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.24□□□□□ -0.93
Col8a2P25318 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm7719-201ENSMUST00000182374 975 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
Col8a2P25318 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.24□□□□□ -0.93
Col8a2P25318 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.24□□□□□ -0.93
Col8a2P25318 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.24□□□□□ -0.93
Col8a2P25318 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Col8a2P25318 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Col8a2P25318 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Col8a2P25318 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
Col8a2P25318 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.23□□□□□ -0.93
Col8a2P25318 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Gm25562-201ENSMUST00000104608 133 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm44216-201ENSMUST00000203942 157 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 AC115304.2-201ENSMUST00000226399 332 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Capsl-202ENSMUST00000226688 739 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Gm10020-201ENSMUST00000081993 612 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Col8a2P25318 AA474408-201ENSMUST00000098110 3339 ntBASIC9.23□□□□□ -0.93
Col8a2P25318 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Col8a2P25318 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms