Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.47□□□□□ -0.57
Rb1P13405 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.47□□□□□ -0.57
Rb1P13405 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rb1P13405 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.47□□□□□ -0.57
Rb1P13405 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Gm9135-201ENSMUST00000182963 990 ntBASIC11.47□□□□□ -0.57
Rb1P13405 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.47□□□□□ -0.57
Rb1P13405 Gm8574-201ENSMUST00000203207 924 ntBASIC11.47□□□□□ -0.57
Rb1P13405 Gm35713-201ENSMUST00000210516 199 ntBASIC11.47□□□□□ -0.57
Rb1P13405 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Gm9139-201ENSMUST00000218817 700 ntBASIC11.47□□□□□ -0.57
Rb1P13405 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rb1P13405 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Gm5805-201ENSMUST00000072779 456 ntBASIC11.47□□□□□ -0.57
Rb1P13405 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Rb1P13405 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rb1P13405 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.47□□□□□ -0.57
Rb1P13405 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
Rb1P13405 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.46□□□□□ -0.57
Rb1P13405 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.46□□□□□ -0.57
Rb1P13405 Gm5621-201ENSMUST00000187303 640 ntBASIC11.46□□□□□ -0.57
Rb1P13405 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Rb1P13405 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.46□□□□□ -0.57
Rb1P13405 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.46□□□□□ -0.57
Rb1P13405 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.46□□□□□ -0.57
Rb1P13405 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Gm9111-201ENSMUST00000219394 709 ntBASIC11.46□□□□□ -0.57
Rb1P13405 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rb1P13405 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Rb1P13405 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rb1P13405 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Rb1P13405 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.46□□□□□ -0.58
Rb1P13405 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rb1P13405 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms