Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Fv4P11370 Gm9257-201ENSMUST00000221254 232 ntBASIC10.71□□□□□ -0.69
Fv4P11370 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Fv4P11370 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Fv4P11370 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Fv4P11370 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Fv4P11370 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Fv4P11370 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Fv4P11370 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Fv4P11370 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.71□□□□□ -0.7
Fv4P11370 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Fv4P11370 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Fv4P11370 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Fv4P11370 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
Fv4P11370 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Fv4P11370 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.7□□□□□ -0.7
Fv4P11370 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.7□□□□□ -0.7
Fv4P11370 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Fv4P11370 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Fv4P11370 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.7□□□□□ -0.7
Fv4P11370 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.7□□□□□ -0.7
Fv4P11370 Gm4917-201ENSMUST00000121452 650 ntBASIC10.7□□□□□ -0.7
Fv4P11370 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.7□□□□□ -0.7
Fv4P11370 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.7□□□□□ -0.7
Fv4P11370 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Fv4P11370 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Gm10020-201ENSMUST00000081993 612 ntBASIC10.7□□□□□ -0.7
Fv4P11370 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Fv4P11370 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.7□□□□□ -0.7
Fv4P11370 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Fv4P11370 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Fv4P11370 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Fv4P11370 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.69□□□□□ -0.7
Fv4P11370 Gm12165-201ENSMUST00000117047 342 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Gm11956-201ENSMUST00000119525 512 ntBASIC10.69□□□□□ -0.7
Fv4P11370 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.69□□□□□ -0.7
Fv4P11370 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms