Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Cacna1c-222ENSMUST00000190285 6585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Arid5b-204ENSMUST00000219238 7581 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P04224 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P04224 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P04224 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P04224 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P04224 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
P04224 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Gm11222-201ENSMUST00000119005 738 ntBASIC9.72□□□□□ -0.85
P04224 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.72□□□□□ -0.85
P04224 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.72□□□□□ -0.85
P04224 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC9.72□□□□□ -0.85
P04224 Gm43433-201ENSMUST00000196573 481 ntBASIC9.72□□□□□ -0.85
P04224 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Gm43966-201ENSMUST00000203301 612 ntBASIC9.72□□□□□ -0.85
P04224 Gm45598-202ENSMUST00000210719 986 ntBASIC9.72□□□□□ -0.85
P04224 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.72□□□□□ -0.85
P04224 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Gm5455-201ENSMUST00000058710 715 ntBASIC9.72□□□□□ -0.85
P04224 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.72□□□□□ -0.85
P04224 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Arid1b-203ENSMUST00000115799 9888 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.72□□□□□ -0.85
P04224 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.72□□□□□ -0.85
P04224 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.72□□□□□ -0.85
P04224 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
P04224 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
P04224 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.71□□□□□ -0.85
P04224 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.71□□□□□ -0.85
P04224 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
P04224 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.71□□□□□ -0.86
P04224 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.71□□□□□ -0.86
P04224 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.71□□□□□ -0.86
P04224 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.71□□□□□ -0.86
P04224 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.71□□□□□ -0.86
P04224 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.71□□□□□ -0.86
P04224 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.71□□□□□ -0.86
P04224 Rps4l-202ENSMUST00000204242 789 ntBASIC9.71□□□□□ -0.86
P04224 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC9.71□□□□□ -0.86
P04224 Gm18054-201ENSMUST00000207539 555 ntBASIC9.71□□□□□ -0.86
P04224 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.71□□□□□ -0.86
P04224 Gm2553-201ENSMUST00000215986 605 ntBASIC9.71□□□□□ -0.86
P04224 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.71□□□□□ -0.86
P04224 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
P04224 Gm37759-201ENSMUST00000194155 3246 ntBASIC9.71□□□□□ -0.86
P04224 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.71□□□□□ -0.86
P04224 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC9.71□□□□□ -0.86
P04224 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.71□□□□□ -0.86
P04224 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Nkx2-2os-201ENSMUST00000136998 4345 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.71□□□□□ -0.86
P04224 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.71□□□□□ -0.86
P04224 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
P04224 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms