Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 AC167565.1-201ENSMUST00000226980 1833 ntBASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc180J3QNE4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Gm12470-201ENSMUST00000117239 1049 ntBASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Gm7904-201ENSMUST00000217049 465 ntBASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Gm16228-201ENSMUST00000162286 809 ntBASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc180J3QNE4 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Ptprm-203ENSMUST00000224091 3773 ntBASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Gm12377-201ENSMUST00000118656 252 ntBASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Gm38233-201ENSMUST00000194259 807 ntBASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Gm18862-201ENSMUST00000204643 933 ntBASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ccdc180J3QNE4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Uba52-ps-201ENSMUST00000183770 379 ntBASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Gm43106-201ENSMUST00000199485 637 ntBASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc180J3QNE4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm15746-201ENSMUST00000120684 1027 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm14176-201ENSMUST00000121302 477 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm11736-201ENSMUST00000121468 505 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm9619-201ENSMUST00000211587 762 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm7242-201ENSMUST00000221134 705 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Gm5424-201ENSMUST00000053865 1240 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc180J3QNE4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms