Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm25766-201ENSMUST00000104101 131 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm14395-201ENSMUST00000120494 563 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm5996-201ENSMUST00000211110 718 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 CT009536.2-201ENSMUST00000225370 665 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Gm44056-201ENSMUST00000204623 1427 ntBASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Usf3B2RUQ2 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm25554-201ENSMUST00000158075 113 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm20495-201ENSMUST00000173902 235 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm5700-201ENSMUST00000191483 989 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 AC153962.2-201ENSMUST00000219417 550 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 AC154572.1-201ENSMUST00000226098 1204 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm5805-201ENSMUST00000072779 456 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm22594-201ENSMUST00000104251 130 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm14213-201ENSMUST00000119778 768 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm13019-201ENSMUST00000120000 276 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gng5-ps-201ENSMUST00000120931 205 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm8459-201ENSMUST00000162504 760 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm28937-201ENSMUST00000185413 695 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm29400-201ENSMUST00000187208 695 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm28662-201ENSMUST00000188446 695 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm28251-201ENSMUST00000188835 695 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm37318-201ENSMUST00000194325 695 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm38017-201ENSMUST00000194768 695 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm37826-201ENSMUST00000195329 322 ntBASIC9.29□□□□□ -0.92
Usf3B2RUQ2 Gm37287-201ENSMUST00000195449 695 ntBASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms