Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm6092-201ENSMUST00000121659 2029 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm12849-201ENSMUST00000120013 739 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm43037-201ENSMUST00000196808 250 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm43058-201ENSMUST00000197645 625 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm8913-201ENSMUST00000209491 641 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm5996-201ENSMUST00000211110 718 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gm7357-201ENSMUST00000195361 2991 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Brpf3B2KF05 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Vwce-201ENSMUST00000055115 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm12380-201ENSMUST00000119012 544 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Mir8109-201ENSMUST00000184375 117 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm29615-201ENSMUST00000185371 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28224-201ENSMUST00000186078 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm29001-201ENSMUST00000186177 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28292-201ENSMUST00000186593 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28101-201ENSMUST00000187608 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm29076-201ENSMUST00000187689 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28302-201ENSMUST00000187931 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28646-201ENSMUST00000188220 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28205-201ENSMUST00000189177 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm29032-201ENSMUST00000189797 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm28695-201ENSMUST00000190300 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm37448-201ENSMUST00000192795 697 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm38317-201ENSMUST00000195564 343 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm45865-201ENSMUST00000211815 945 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Cts7-204ENSMUST00000225321 1257 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Clip3-201ENSMUST00000014065 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.28□□□□□ -0.44
Brpf3B2KF05 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Brpf3B2KF05 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms