Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Mir1901-201ENSMUST00000122616 78 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm7255-201ENSMUST00000187371 908 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm18042-201ENSMUST00000219887 790 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 BC043934-202ENSMUST00000185694 2356 ntBASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Upk3aQ9JKX8 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm9673-201ENSMUST00000119287 781 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm5210-201ENSMUST00000182150 1010 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm27441-201ENSMUST00000185000 105 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm5100-201ENSMUST00000195631 589 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm44814-201ENSMUST00000207018 434 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm7525-201ENSMUST00000219425 454 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.66□□□□□ -0.7
Upk3aQ9JKX8 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Upk3aQ9JKX8 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms