Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm8531-201ENSMUST00000188319 893 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm5996-201ENSMUST00000211110 718 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm45594-201ENSMUST00000211717 241 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm45856-201ENSMUST00000212752 416 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm9139-201ENSMUST00000218817 700 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm6722-201ENSMUST00000221586 390 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Btrc-209ENSMUST00000224478 2194 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.36□□□□□ -0.75
Cdc40Q9DC48 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm37859-201ENSMUST00000195529 2173 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm12463-201ENSMUST00000118271 849 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm22442-201ENSMUST00000157256 144 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm37458-201ENSMUST00000194055 410 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm37826-201ENSMUST00000195329 322 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 AC122891.1-201ENSMUST00000218671 268 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm19046-201ENSMUST00000221263 1298 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm5451-201ENSMUST00000080545 579 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Cdc40Q9DC48 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cdc40Q9DC48 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms