Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm11478-201ENSMUST00000117851 599 ntBASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm27731-201ENSMUST00000185192 107 ntBASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm6013-201ENSMUST00000212264 699 ntBASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gzmn-202ENSMUST00000225535 989 ntBASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Sf3a3Q9D554 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Sf3a3Q9D554 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Sf3a3Q9D554 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Sf3a3Q9D554 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.15□□□□□ -0.63
Sf3a3Q9D554 AC153498.1-201ENSMUST00000219775 2722 ntBASIC11.15□□□□□ -0.63
Sf3a3Q9D554 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Sf3a3Q9D554 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Sf3a3Q9D554 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Mrpl51-201ENSMUST00000032485 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Mir1247-201ENSMUST00000116706 82 ntBASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Gm11511-201ENSMUST00000118146 540 ntBASIC11.13□□□□□ -0.63
Sf3a3Q9D554 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Sf3a3Q9D554 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms