Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm14542-201ENSMUST00000118460 1248 ntBASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm7150-201ENSMUST00000122032 981 ntBASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm14381-201ENSMUST00000122105 414 ntBASIC10.29□□□□□ -0.76
Trim13Q9CYB0 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm20495-201ENSMUST00000173902 235 ntBASIC10.29□□□□□ -0.76
Trim13Q9CYB0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm37436-201ENSMUST00000193842 1085 ntBASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.29□□□□□ -0.76
Trim13Q9CYB0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm15207-201ENSMUST00000119259 442 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm20482-202ENSMUST00000174729 825 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm44651-201ENSMUST00000207343 372 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm17827-201ENSMUST00000211825 742 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trim13Q9CYB0 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Trim13Q9CYB0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim13Q9CYB0 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim13Q9CYB0 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trim13Q9CYB0 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.27□□□□□ -0.77
Trim13Q9CYB0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms