Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm14276-201ENSMUST00000117941 720 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm23521-201ENSMUST00000177845 110 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm18122-201ENSMUST00000211390 904 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm14592-201ENSMUST00000117201 560 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm25319-201ENSMUST00000122552 325 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 4933424L21Rik-201ENSMUST00000142486 1186 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Faap24-203ENSMUST00000154597 831 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm12424-201ENSMUST00000179673 447 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 AC124400.2-201ENSMUST00000224939 253 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.95□□□□□ -0.66
Cdh23Q99PF4 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Trav9n-1-201ENSMUST00000185224 339 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm42617-201ENSMUST00000197640 1229 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm26913-201ENSMUST00000182391 732 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm38227-201ENSMUST00000193036 1602 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gng12-207ENSMUST00000114228 748 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm15369-201ENSMUST00000119681 394 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm18749-201ENSMUST00000222410 692 ntBASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Fibp-201ENSMUST00000025847 1215 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdh23Q99PF4 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cdh23Q99PF4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms